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Kandel, A., & Aguilar-Islas, A. (2021). Spatial and temporal variability of dissolved aluminum and manganese in surface waters of the northern Gulf of Alaska. Deep Sea Research Part II: Topical Studies in Oceanography, 104952. https://doi.org/10.1016/j.dsr2.2021.104952
Suryan, R. M., Arimitsu, M. L., Coletti, H. A., Hopcroft, R. R., Lindeberg, M. R., Barbeaux, S. J., Batten, S. D., Burt, W. J., Bishop, M. A., Bodkin, J. L., Brenner, R., Campbell, R. W., Cushing, D. A., Danielson, S. L., Dorn, M. W., Drummond, B., Esler, D., Gelatt, T., Hanselman, D. H., … Zador, S. G. (2021). Ecosystem response persists after a prolonged marine heatwave. Scientific Reports, 11(1), 6235. https://doi.org/10.1038/s41598-021-83818-5
Arimitsu, M., Piatt, J., Hatch, S., Suryan, R. M., Batten, S., Bishop, M. A., Campbell, R. W., Coletti, H., Cushing, D., Gorman, K., Hopcroft, R. R., Kuletz, K. J., Marsteller, C., McKinstry, C., McGowan, D., Moran, J., Pegau, W. S., Schaefer, A., Schoen, S., … Biela, V. R. von. (2021). Heatwave-induced synchrony within forage fish portfolio disrupts energy flow to top pelagic predators. Global Change Biology, n/a(n/a). https://doi.org/https://doi.org/10.1111/gcb.15556
Hauri, C., Schultz, C., Hedstrom, K., Danielson, S., Irving, B., Doney, S. C., Dussin, R., Curchitser, E. N., Hill, D. F., & Stock, C. A. (2020). A regional hindcast model simulating ecosystem dynamics, inorganic carbon chemistry, and ocean acidification in the Gulf of Alaska. Biogeosciences, 17(14), 3837–3857. https://doi.org/https://doi.org/10.5194/bg-17-3837-2020
Litzow, M. A., Hunsicker, M. E., Ward, E. J., Anderson, S. C., Gao, J., Zador, S. G., Batten, S., Dressel, S. C., Duffy-Anderson, J., Fergusson, E., Hopcroft, R. R., Laurel, B. J., & O’Malley, R. (2020). Evaluating ecosystem change as Gulf of Alaska temperature exceeds the limits of preindustrial variability. Progress in Oceanography, 186, 102393. https://doi.org/10.1016/j.pocean.2020.102393
Danielson, S. L., Hill, D. F., Hedstrom, K. S., Beamer, J., & Curchitser, E. (2020). Demonstrating a High-Resolution Gulf of Alaska Ocean Circulation Model Forced Across the Coastal Interface by High-Resolution Terrestrial Hydrological Models. Journal of Geophysical Research: Oceans, 125(8), e2019JC015724. https://doi.org/10.1029/2019JC015724
Roncalli, V., Cieslak, M. C., Hopcroft, R. R., & Lenz, P. H. (2020). Capital Breeding in a Diapausing Copepod: A Transcriptomics Analysis. Frontiers in Marine Science, 7. https://doi.org/10.3389/fmars.2020.00056
Ormseth, O. A., Baker, M. M., Hopcroft, R. R., Ladd, C., Mordy, C. W., Moss, J. H., Mueter, F. J., Shotwell, S. K., & Strom, S. L. (2019). Introduction to understanding ecosystem processes in the gulf of Alaska, volume 2. Deep Sea Research Part II: Topical Studies in Oceanography, 165, 1–6. https://doi.org/10.1016/j.dsr2.2019.06.019
Strom, S. L., Fredrickson, K. A., & Bright, K. J. (2019). Microzooplankton in the coastal Gulf of Alaska: Regional, seasonal and interannual variations. Deep Sea Research Part II: Topical Studies in Oceanography, 165, 192–202. https://doi.org/10.1016/j.dsr2.2018.07.012
Roncalli, V., Cieslak, M. C., Germano, M., Hopcroft, R. R., & Lenz, P. H. (2019). Regional heterogeneity impacts gene expression in the subarctic zooplankter Neocalanus flemingeri in the northern Gulf of Alaska. Communications Biology, 2(1). https://doi.org/10.1038/s42003-019-0565-5
Cieslak, M. C., Castelfranco, A. M., Roncalli, V., Lenz, P. H., & Hartline, D. K. (2019). t-Distributed Stochastic Neighbor Embedding (t-SNE): A tool for eco-physiological transcriptomic analysis. Marine Genomics, 100723. https://doi.org/10.1016/j.margen.2019.100723
Lenz, P. H., & Roncalli, V. (2019). Diapause within the Context of Life-History Strategies in Calanid Copepods (Calanoida: Crustacea). The Biological Bulletin, 237(2), 170–179. https://doi.org/10.1086/705160
Coyle, K. O., Hermann, A. J., & Hopcroft, R. R. (2019). Modeled spatial-temporal distribution of productivity, chlorophyll, iron and nitrate on the northern Gulf of Alaska shelf relative to field observations. Deep Sea Research Part II: Topical Studies in Oceanography, 165, 163–191. https://doi.org/10.1016/j.dsr2.2019.05.006
Doyle, M. J., Strom, S. L., Coyle, K. O., Hermann, A. J., Ladd, C., Matarese, A. C., Shotwell, S. K., & Hopcroft, R. R. (2019). Early life history phenology among Gulf of Alaska fish species: Strategies, synchronies, and sensitivities. Deep Sea Research Part II: Topical Studies in Oceanography, 165, 41–73. https://doi.org/10.1016/j.dsr2.2019.06.005
Campbell, R. W. (2018). Hydrographic trends in Prince William Sound, Alaska, 1960–2016. Deep Sea Research Part II: Topical Studies in Oceanography, 147, 43–57. https://doi.org/10.1016/j.dsr2.2017.08.014
Roncalli, V., Sommer, S. A., Cieslak, M. C., Clarke, C., Hopcroft, R. R., & Lenz, P. H. (2018). Physiological characterization of the emergence from diapause: A transcriptomics approach. Scientific Reports, 8(1). https://doi.org/10.1038/s41598-018-30873-0
Roncalli, V., Cieslak, M. C., Sommer, S. A., Hopcroft, R. R., & Lenz, P. H. (2018). De novo transcriptome assembly of the calanoid copepod Neocalanus flemingeri: A new resource for emergence from diapause. Marine Genomics, 37, 114–119. https://doi.org/10.1016/j.margen.2017.09.002
Cushing, D. A., Roby, D. D., & Irons, D. B. (2018). Patterns of distribution, abundance, and change over time in a subarctic marine bird community. Deep Sea Research Part II: Topical Studies in Oceanography, 147, 148–163. https://doi.org/10.1016/j.dsr2.2017.07.012
Batten, S. D., Raitsos, D. E., Danielson, S., Hopcroft, R., Coyle, K., & McQuatters-Gollop, A. (2018). Interannual variability in lower trophic levels on the Alaskan Shelf. Deep Sea Research Part II: Topical Studies in Oceanography, 147, 58–68. https://doi.org/10.1016/j.dsr2.2017.04.023
Ducklow, H. W., Cimino, M., Dunton, K. O., Hopcroft, R. R., Ji, R., Miller, A. J., & Sosik, H. M. (submitted). Marine coastal pelagic ecosystem responses to climate variability and change. Bioscience.
Cushing, D. A., Kuletz, K. J., De Sousa, L., Day, R. H., Danielson, S. L., Labunski, E. A., & Hopcroft, R. R. (in prep.). Seabird responses to physical variability along a cross-shelf transect in the northern Gulf of Alaska during spring, 1998-2019.
Hauri, C., Pages, R., McDonnell, A. M. P., Stuecker, M. F., Danielson, S. L., Hedstrom, K., Irving, B., Schultz, C., & Doney, S. C. (accepted). Modulation of ocean acidification by decadal climate variability in the Gulf of Alaska. Communications Earth & Environment.

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