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Lowin, B., Strom, S., Burt, W., Kelly, T., & Rivero-Calle, S. (2024). Temporal variability in the relationship between line height absorption and chlorophyll concentration: a case study from the Northern Gulf of Alaska. Optics Express, 32(12), 20491–20502. https://doi.org/https://doi.org/10.1364/OE.521758
O’Daly, S. H., Hennon, G. M., Kelly, T. B., Strom, S. L., & McDonnell, A. M. P. (2024). Strong and efficient summertime carbon export driven by aggregation processes in a subarctic coastal ecosystem. Limnology and Oceanography. https://doi.org/https://doi.org/10.1002/lno.12561
Hauri, C., Pages, R., Hedstrom, K., Doney, S. C., Dupont, S., Ferriss, B., & Stuecker, M. F. (2024). More Than Marine Heatwaves: A New Regime of Heat, Acidity, and Low Oxygen Compound Extreme Events in the Gulf of Alaska. AGU Advances, 5(1). https://doi.org/https://doi.org/10.1029/2023AV001039
Monacci, N. M., Cross, J. N., Evans, W., Mathis, J. T., & Wang, H. (2024). A decade of marine inorganic carbon chemistry observations in the northern Gulf of Alaska – insights into an environment in transition. Earth System Science Data, 16(1). https://doi.org/https://doi.org/10.5194/essd-16-647-2024
Strom, S. L., Bright, K. J., & Fredrickson, K. A. (2024). Widespread ciliate and dinoflagellate mixotrophy may contribute to ecosystem resilience in a subarctic sea: the northern Gulf of Alaska. Aquatic Microbial Ecology, 90, 1–21. https://doi.org/doi:10.3354/ame02005
Islas, H. M. C., & Hopcroft, R. R. (2023). Abundance, composition and distribution of carnivorous gelatinous zooplankton in the Northern Gulf of Alaska. Journal of Plankton Research, 45(4), 693–708. https://doi.org/https://doi.org/10.1093/plankt/fbad032
Monell, K. J., Roncalli, V., Hopcroft, R. R., Hartline, D. K., & Lenz, P. H. (2023). Post-Diapause DNA Replication during Oogenesis in a Capital-Breeding Copepod. Integrative Organismal Biology, 5(1). https://doi.org/10.1093/iob/obad020
Hartline, D. K., Cieslak, M. C., Castelfranco, A. M., Lieberman, B., Roncalli, V., & Lenz, P. H. (2023). De novo transcriptomes of six calanoid copepods (Crustacea): a resource for the discovery of novel genes. Nature Scientific Data, 10(242). https://doi.org/https://doi.org/10.1038/s41597-023-02130-1
Cushing, D. A., Kuletz, K. J., Sousa, L., Day, R. H., Danielson, S. L., Labunski, E. A., & Hopcroft, R. R. (2023). Differential response of seabird species to warm- and cold-water events in a heterogeneous cross-shelf environment in the Gulf of Alaska. Marine Ecology Progress Series. https://doi.org/https://doi.org/10.3354/meps14239
Despins, M. C., Mason, R. P., Aguilar-Islas, A. M., Lamborg, C. H., Hammerschmidt, C. R., & Newell, S. E. (2023). Linked mercury methylation and nitrification across oxic subpolar regions. Frontiers in Environmental Chemistry, 4(1109537). https://doi.org/https://doi.org/10.3389/fenvc.2023.1109537
Strom, S., & Northern Gulf of Alaska Long-Term Ecosystem Research Team. (2023). Recent Marine Heatwaves Affect Marine Ecosystems from Plankton to Seabirds in the Northern Gulf of Alaska. Oceanography, 36(1). https://doi.org/https://doi.org/10.5670/oceanog.2023.s1.9
Roncalli, V., Cieslak, M. C., Castelfranco, A. M., Hartline, D. K., & Lenz, P. H. (2022). Postponing development: dormancy in the earliest developmental stages of a high-latitude calanoid copepod. Journal of Plankton Research, 44(6), 923–935. https://doi.org/https://doi.org/10.1093/plankt/fbac039
Ducklow, H., Cimino, M., Dunton, K. H., Fraser, W. R., Hopcroft, R. R., Ji, R., Miller, A. J., Ohman, M. D., & Sosik, H. M. (2022). Marine Pelagic Ecosystem Responses to Climate Variability and Change. BioScience, 72(9), 827–850. https://doi.org/https://doi.org/10.1093/biosci/biac050
Roncalli, V., Niestroy, J., Cieslak, M. C., Castelfranco, A. M., Hopcroft, R. R., & Lenz, P. H. (2022). Physiological acclimatization in high-latitude zooplankton. Molecular Ecology, 31(6), 1753–1765. https://doi.org/10.1111/mec.16354
Danielson, S. L., Hennon, T. D., Monson, D. H., Suryan, R. M., Campbell, R. W., Baird, S. J., Holderied, K., & Weingartner, T. J. (2022). Temperature variations in the northern Gulf of Alaska across synoptic to century-long time scales. Deep Sea Research Part II: Topical Studies in Oceanography, 203. https://doi.org/https://doi.org/10.1016/j.dsr2.2022.105155
Kandel, A., & Aguilar-Islas, A. (2021). Spatial and temporal variability of dissolved aluminum and manganese in surface waters of the northern Gulf of Alaska. Deep Sea Research Part II: Topical Studies in Oceanography, 104952. https://doi.org/10.1016/j.dsr2.2021.104952
Suryan, R. M., Arimitsu, M. L., Coletti, H. A., Hopcroft, R. R., Lindeberg, M. R., Barbeaux, S. J., Batten, S. D., Burt, W. J., Bishop, M. A., Bodkin, J. L., Brenner, R., Campbell, R. W., Cushing, D. A., Danielson, S. L., Dorn, M. W., Drummond, B., Esler, D., Gelatt, T., Hanselman, D. H., … Zador, S. G. (2021). Ecosystem response persists after a prolonged marine heatwave. Scientific Reports, 11(1), 6235. https://doi.org/10.1038/s41598-021-83818-5
Lenz, P. H., Lieberman, B., Cieslak, M. C., Roncalli, V., & Hartline, D. K. (2021). Transcriptomics and metatranscriptomics in zooplankton: wave of the future? Journal of Plankton Research, 43(1), 3–9. https://doi.org/https://doi.org/10.1093/plankt/fbaa058
Roncalli, V., Cieslak, M. C., Castelfranco, A. M., Hopcroft, R. R., Hartline, D. K., & Lenz, P. H. (2021). Post-diapause transcriptomic restarts: insight from a high-latitude copepod. BMC Genomics, 22(409). https://doi.org/https://doi.org/10.1186/s12864-021-07557-7
Hauri, C., Pages, R., McDonnell, A. M. P., Stuecker, M. F., Danielson, S. L., Hedstrom, K., Irving, B., Schultz, C., & Doney, S. C. (2021). Modulation of ocean acidification by decadal climate variability in the Gulf of Alaska. Communications Earth & Environment, 2(191). https://doi.org/https://doi.org/10.1038/s43247-021-00254-z
Arimitsu, M., Piatt, J., Hatch, S., Suryan, R. M., Batten, S., Bishop, M. A., Campbell, R. W., Coletti, H., Cushing, D., Gorman, K., Hopcroft, R. R., Kuletz, K. J., Marsteller, C., McKinstry, C., McGowan, D., Moran, J., Pegau, W. S., Schaefer, A., Schoen, S., … Biela, V. R. von. (2021). Heatwave-induced synchrony within forage fish portfolio disrupts energy flow to top pelagic predators. Global Change Biology, n/a(n/a). https://doi.org/https://doi.org/10.1111/gcb.15556
Hauri, C., Schultz, C., Hedstrom, K., Danielson, S., Irving, B., Doney, S. C., Dussin, R., Curchitser, E. N., Hill, D. F., & Stock, C. A. (2020). A regional hindcast model simulating ecosystem dynamics, inorganic carbon chemistry, and ocean acidification in the Gulf of Alaska. Biogeosciences, 17(14), 3837–3857. https://doi.org/https://doi.org/10.5194/bg-17-3837-2020
Litzow, M. A., Hunsicker, M. E., Ward, E. J., Anderson, S. C., Gao, J., Zador, S. G., Batten, S., Dressel, S. C., Duffy-Anderson, J., Fergusson, E., Hopcroft, R. R., Laurel, B. J., & O’Malley, R. (2020). Evaluating ecosystem change as Gulf of Alaska temperature exceeds the limits of preindustrial variability. Progress in Oceanography, 186, 102393. https://doi.org/10.1016/j.pocean.2020.102393
Danielson, S. L., Hill, D. F., Hedstrom, K. S., Beamer, J., & Curchitser, E. (2020). Demonstrating a High-Resolution Gulf of Alaska Ocean Circulation Model Forced Across the Coastal Interface by High-Resolution Terrestrial Hydrological Models. Journal of Geophysical Research: Oceans, 125(8), e2019JC015724. https://doi.org/10.1029/2019JC015724
Roncalli, V., Cieslak, M. C., Hopcroft, R. R., & Lenz, P. H. (2020). Capital Breeding in a Diapausing Copepod: A Transcriptomics Analysis. Frontiers in Marine Science, 7. https://doi.org/10.3389/fmars.2020.00056
Ormseth, O. A., Baker, M. M., Hopcroft, R. R., Ladd, C., Mordy, C. W., Moss, J. H., Mueter, F. J., Shotwell, S. K., & Strom, S. L. (2019). Introduction to understanding ecosystem processes in the gulf of Alaska, volume 2. Deep Sea Research Part II: Topical Studies in Oceanography, 165, 1–6. https://doi.org/10.1016/j.dsr2.2019.06.019
Strom, S. L., Fredrickson, K. A., & Bright, K. J. (2019). Microzooplankton in the coastal Gulf of Alaska: Regional, seasonal and interannual variations. Deep Sea Research Part II: Topical Studies in Oceanography, 165, 192–202. https://doi.org/10.1016/j.dsr2.2018.07.012
Roncalli, V., Cieslak, M. C., Germano, M., Hopcroft, R. R., & Lenz, P. H. (2019). Regional heterogeneity impacts gene expression in the subarctic zooplankter Neocalanus flemingeri in the northern Gulf of Alaska. Communications Biology, 2(1). https://doi.org/10.1038/s42003-019-0565-5
Cieslak, M. C., Castelfranco, A. M., Roncalli, V., Lenz, P. H., & Hartline, D. K. (2019). t-Distributed Stochastic Neighbor Embedding (t-SNE): A tool for eco-physiological transcriptomic analysis. Marine Genomics, 100723. https://doi.org/10.1016/j.margen.2019.100723
Lenz, P. H., & Roncalli, V. (2019). Diapause within the Context of Life-History Strategies in Calanid Copepods (Calanoida: Crustacea). The Biological Bulletin, 237(2), 170–179. https://doi.org/10.1086/705160
Doyle, M. J., Strom, S. L., Coyle, K. O., Hermann, A. J., Ladd, C., Matarese, A. C., Shotwell, S. K., & Hopcroft, R. R. (2019). Early life history phenology among Gulf of Alaska fish species: Strategies, synchronies, and sensitivities. Deep Sea Research Part II: Topical Studies in Oceanography, 165, 41–73. https://doi.org/10.1016/j.dsr2.2019.06.005
Coyle, K. O., Hermann, A. J., & Hopcroft, R. R. (2019). Modeled spatial-temporal distribution of productivity, chlorophyll, iron and nitrate on the northern Gulf of Alaska shelf relative to field observations. Deep Sea Research Part II: Topical Studies in Oceanography, 165, 163–191. https://doi.org/10.1016/j.dsr2.2019.05.006
Campbell, R. W. (2018). Hydrographic trends in Prince William Sound, Alaska, 1960–2016. Deep Sea Research Part II: Topical Studies in Oceanography, 147, 43–57. https://doi.org/10.1016/j.dsr2.2017.08.014
Roncalli, V., Sommer, S. A., Cieslak, M. C., Clarke, C., Hopcroft, R. R., & Lenz, P. H. (2018). Physiological characterization of the emergence from diapause: A transcriptomics approach. Scientific Reports, 8(1). https://doi.org/10.1038/s41598-018-30873-0
Roncalli, V., Cieslak, M. C., Sommer, S. A., Hopcroft, R. R., & Lenz, P. H. (2018). De novo transcriptome assembly of the calanoid copepod Neocalanus flemingeri: A new resource for emergence from diapause. Marine Genomics, 37, 114–119. https://doi.org/10.1016/j.margen.2017.09.002
Cushing, D. A., Roby, D. D., & Irons, D. B. (2018). Patterns of distribution, abundance, and change over time in a subarctic marine bird community. Deep Sea Research Part II: Topical Studies in Oceanography, 147, 148–163. https://doi.org/10.1016/j.dsr2.2017.07.012
Batten, S. D., Raitsos, D. E., Danielson, S., Hopcroft, R., Coyle, K., & McQuatters-Gollop, A. (2018). Interannual variability in lower trophic levels on the Alaskan Shelf. Deep Sea Research Part II: Topical Studies in Oceanography, 147, 58–68. https://doi.org/10.1016/j.dsr2.2017.04.023

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